Accès membres

Mot de passe perdu? S'inscrire

05-05-2026 22:40

Gernot Friebes

Hi,I believe this is a Plagiostoma growing on a Sa

04-05-2026 18:13

Stephen Martin Mifsud Stephen Martin Mifsud

ID request for what seems to be a true aquatic fun

04-05-2026 16:39

Stephen Martin Mifsud Stephen Martin Mifsud

ID request: This specimen was collected in Malta o

28-07-2011 18:31

Alex Akulov Alex Akulov

Dear FriendsToday I made the pdf file of Velenovsk

28-04-2026 20:07

Lothar Krieglsteiner Lothar Krieglsteiner

... on twig in the air at standing Ceratonia siliq

04-05-2026 09:50

Castillo Joseba Castillo Joseba

Me mandan el material seco de Galicia,(España) re

03-05-2026 11:38

Castillo Joseba Castillo Joseba

Me mandan el material seco, recolectado en dunasLo

02-05-2026 12:42

Alain BRISSARD

Bonjour à tousJeuidi 30 avril dernier on m'a remi

02-05-2026 13:06

Pauline. Penna

Bonjour  Please can someone help me with this id

01-05-2026 22:45

Thierry Blondelle Thierry Blondelle

Bonjour à tous, Une récolte sur bouse séchée d

« < 1 2 3 4 5 > »
Asco from Mexico, with ITS sequence
Alan Rockefeller, 15-05-2016 02:06
Alan RockefellerHi - 

I recently sequenced one of my collections from a cloud forest in Veracruz, Mexico.    I haven't done any microscopy yet, but I can.

I was surprised to see that there were no close matches.    Can anyone turn this ITS sequence into useful information?

Or will I have to do the micro work to figure out what this is?  

I could also do LSU sequences....

 The ITS sequence is:

CCGCCGTACGTGCCGGGCGTACGCGTCCGGTATCTACGGCGGGGGGCTGTAGAGATAACCACACCCGTGT
ATAGCCTACTCTTGTTGCTTTGGCAGGCCGTGGTCTCCACTGTGGGCTTTGCTCACACGTGCCCGCCAGA
GGATTTAATTCTGAATATTGGTGTCGTCTGAGTACTATATAATAGTTAAAACTTTCAACAACGGATCTCT
TGGTTCTGGCATCGATGAAGAACGCAGCGAAATGCGATAAGTAATGTGAATTGCAGAATTCAGTGAATCA
TCGAATCTTTGAACGCACATTGCGCCCGGTGGTATTCTGCCGGGCATGCCTGTTCGAGCGTCATTGTGAC
CAATCAAGCTCGGCTTGGTGTTGGGTCCGCGGAATCGCGGTCCTCAAATCTGGTGGCGGTGCCATTGGGC
TCTAAGCGTAGTAAATGCTCTCCCGCTATAGAGTTCCTCTGGTAGCTTGCCAGAACCCCCCACTTTCTAC
GGTTGACCTCGGATCAGGTAGGGATACCCGCTGAACTTAAGCATATCAATAAGCGGAGGAA

  • message #42693
Christian Lechat, 15-05-2016 08:09
Christian Lechat
Re : Asco from Mexico, with ITS sequence
Hi Alan,
here is a phylo-tree genarated by the Blastn of your sequence, which suggests that the closest genus to your fungus could be Phialocephala.

Regards,
Christian
Michel Hairaud, 15-05-2016 08:56
Michel Hairaud
Re : Asco from Mexico, with ITS sequence

Bonjour Alan,


The genus name proposed by Christian sounds fully exotic to me . I would appreciate closer macro pictures and of course also micros . According to Syllabus of Plant Families, it belongs in the Mollisiaceae families ...


Amitiés


Michel

Hans-Otto Baral, 15-05-2016 09:28
Hans-Otto Baral
Re : Asco from Mexico, with ITS sequence
I also recommend to make a brief microscopic analysis, so that we know if they are apothecia on the photo or something anamorphic.

If you have the fungus fresh, please do it in water, also if it was dried no longer than a few months ago. The spores could still be alive and then give more information.

In my Mollisia tree it falls with great distance near Barrenia and Phialocephala urceolata/Mollisia olivascens, but that could be an accident.

Zotto